COG Summer Workshop 2021
Intermediate
Linux/Owlsnest
07/01/2021
**Content creator:** Katie Jobson, Haroon Popal
**Content editor:** Elizabeth Beard
Description
In this workshop, we walk attendees through the basics of what a linux computer is and how the Olson lab uses it as a server. In the second part of the workshop, we introduce Owslnest, the high performance cluster (HPC) at Temple University and go over how you can get started using it.
Prerequisites
- Basic knowledge of bash scripting
- An OwlsNest account (optional)
Set Up (do before the workshop)
- Apply for an OwlsNest account with the High Performance Computing team here: https://www.hpc.temple.edu/
Workshop objectives:
- Learn about Linux machines and their uses
- Gain the ability to log on and navigate OwlsNest
- Review how to setup a script to be submitted to the cluster
- Learn how to submit that script to the cluster and monitor jobs
Workshop Materials
Outline
| Topic | Time | Time |
|---|---|---|
| Intro | The need for more computational power | 5 min |
| Tutorial 1 | Linux machines | 20 min |
| Tutorial 2 | OwlsNest HPC | 20 min |
| Outro | See it in use | 5 min |
Additional Resources
- https://www.hpc.temple.edu/owlsnest2/